Sorry to burst your thought bubble but there is only one tree
So the Scenetree is constructed as follows
Root > Main > Branch > Leaves
> Branch > Leaves
> Branch > Leaves > More leaves
And when you add Autoloads
Root > Main > Branch > Leaves
> Autoload > Branch > Leaves
In these examples the Branches can be nodes or scene instances and the Leaves thier children, while main and autoloads can be considered stems/trunks.
To access the main node which i suspect is your intention use get_tree().get_current_scene()
or if not then use get_tree().get_root()
which will be the node at the very base of the Scenetree and all nodes can be accessed from it like a filesystem structure.
E.g.
get_node("/Main/Branch/Leaf")